Lecture 1 - Introduction to Different OMICS Approaches and their Applications
Lecture 2 - Genetic Information in Prokaryotic
Lecture 3 - Databases and Web Resources to Store and Access the Biological Data
Lecture 4 - First and Second Generation Sequencing Technologies
Lecture 5 - Long Read Sequencing and Linked Read Sequencing - Part 1
Lecture 6 - Long Read Sequencing and Linked Read Sequencing - Part 2
Lecture 7 - Sequence Formats and Databases for Genomic Analysis
Lecture 8 - Introduction to Linux
Lecture 9 - File Handling and Remote Connectivity in Linux
Lecture 10 - Running Linux Commands and Installation of Genomic Packages
Lecture 11 - Introduction to R and Applications in Genomic Analysis
Lecture 12 - Publicly Available Tools and Need for Workstations for Genomic Analysis
Lecture 13 - Overview of Genomic and Transcriptomic Analysis
Lecture 14 - Genomic and Transcriptomic Analysis of an Organism with Case Studies
Lecture 15 - How to Collect and Confirm Sample of the Species to be Sequenced and Transcriptome Sequencing Approaches
Lecture 16 - Estimating the Amount of Sequencing Coverage for a Genome and Hybrid Sequencing Approaches
Lecture 17 - Types of Reads, Quality Filtering, Estimating the Genome Complexity and Heterozygosity
Lecture 18 - Genome Assembly and its Completion Status, Assembly Algorithms
Lecture 19 - Commonly Used Assembly Tools
Lecture 20 - Linked-Read Sequencing and Processing
Lecture 21 - Long Reads Analysis and Assembly Workflow
Lecture 22 - De novo Assembly Using Genomic and Transcriptomic Reads
Lecture 23 - Merging Assemblies to Create Hybrid Assembly and Determining the Quality of Assembly
Lecture 24 - Chromosomal Level Assembly and Case Studies
Lecture 25 - Identification and Annotation of Repeats in Genomes
Lecture 26 - De novo Transcriptome Assembly and Making the Coding Gene Set
Lecture 27 - Prediction of tRNA, rRNA and miRNA in a Genome
Lecture 28 - Functional Annotation and Identification of Metabolic Pathways in a Genome
Lecture 29 - Comprehensive Functional Annotation of Predicted Genes in a Genome
Lecture 30 - Functional Annotation of Predicted Genes by Alternate Methods
Lecture 31 - Methods and Steps to Perform the Evolutionary Analysis of a Genome
Lecture 32 - Methods for Taxonomic Classification and Phylogeny Econstruction and Analysis
Lecture 33 - Epigenetics, ChIp-seq, Transcriptome and Microarrays for Regulation of Expression
Lecture 34 - Single Cell Genomics, 10X Chromium Linked-reads and Illumina Sequencing, Single Cell Gene Expression
Lecture 35 - Application of Multiomics Approaches in Human Health and Diseases Such as Cancer, Diabetes, etc.
Lecture 36 - Prokaryotic Genome Sequencing and Assembly Approaches
Lecture 37 - Gene Prediction Approaches and Common Methods for Bacterial Gene Prediction
Lecture 38 - Common Methods for Annotation of a Bacterial Genome, t-RNA, rRNA, Operon Prediction and Annotation
Lecture 39 - Phylogenetic Analysis of Bacterial Genomes
Lecture 40 - Metabolic and Comparative Analysis
Lecture 41 - Microbiome and Metagenome, Human, Organismal and Environmental Microbiomes
Lecture 42 - Sequencing and Assembly of Metagenomes, Gene Prediction, Annotation, MAGs - Part 1
Lecture 43 - Sequencing and Assembly of Metagenomes, Gene Prediction, Annotation, MAGs - Part 2
Lecture 44 - Taxonomic Analysis Using Amplicon Sequence Variants, Statistical Analysis
